J3_6WDK_023

3D structure

PDB id

6WDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDK|1|3|G|1003
6WDK|1|3|A|1004
6WDK|1|3|A|1005
6WDK|1|3|G|1006
*
6WDK|1|3|U|1023
6WDK|1|3|G|1024
6WDK|1|3|U|1025
6WDK|1|3|G|1026
6WDK|1|3|C|1027
6WDK|1|3|C|1028
*
6WDK|1|3|G|1033
6WDK|1|3|G|1034
6WDK|1|3|A|1035
6WDK|1|3|A|1036
6WDK|1|3|C|1037

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain S

30S ribosomal protein S14