3D structure

PDB id
6WNV (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome without free 5S rRNA and with a perturbed PTC
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGA*UUUAAAGAAAG*CUCAC
Length
19 nucleotides
Bulged bases
6WNV|1|4|A|1216
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WNV|1|4|G|1183
6WNV|1|4|G|1184
6WNV|1|4|A|1185
*
6WNV|1|4|U|1209
6WNV|1|4|U|1210
6WNV|1|4|U|1211
6WNV|1|4|A|1212
6WNV|1|4|A|1213
6WNV|1|4|A|1214
6WNV|1|4|G|1215
6WNV|1|4|A|1216
6WNV|1|4|A|1217
6WNV|1|4|A|1218
6WNV|1|4|G|1219
*
6WNV|1|4|C|1228
6WNV|1|4|U|1229
6WNV|1|4|C|1230
6WNV|1|4|A|1231
6WNV|1|4|C|1232

Current chains

Chain 4
23s-5s joint ribosomal RNA

Nearby chains

Chain F
50S ribosomal protein L36
Chain f
50S ribosomal protein L6
Chain h
50S ribosomal protein L10
Chain i
50S ribosomal protein L11

Coloring options:

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