J3_6WNV_023

3D structure

PDB id

6WNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome without free 5S rRNA and with a perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

6WNV|1|4|U|2462, 6WNV|1|4|A|2464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WNV|1|4|C|2423
6WNV|1|4|U|2424
6WNV|1|4|A|2425
6WNV|1|4|A|2426
6WNV|1|4|U|2427
*
6WNV|1|4|A|2445
6WNV|1|4|G|2446
6WNV|1|4|G|2447
6WNV|1|4|U|2448
6WNV|1|4|U|2449
6WNV|1|4|A|2450
6WNV|1|4|G|2451
*
6WNV|1|4|C|2460
6WNV|1|4|A|2461
6WNV|1|4|U|2462
6WNV|1|4|A|2463
6WNV|1|4|A|2464
6WNV|1|4|G|2465

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain e

50S ribosomal protein L5

Chain o

50S ribosomal protein L18

Chain w

50S ribosomal protein L27