J3_6WNW_002
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGG*CUUG*CG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6WNW_002 not in the Motif Atlas
- Geometric match to J3_5J7L_002
- Geometric discrepancy: 0.138
- The information below is about J3_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_56052.5
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
6WNW|1|3|C|586
6WNW|1|3|G|587
6WNW|1|3|G|588
*
6WNW|1|3|C|651
6WNW|1|3|U|652
6WNW|1|3|U|653
6WNW|1|3|G|654
*
6WNW|1|3|C|754
6WNW|1|3|G|755
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain M
- 30S ribosomal protein S8
- Chain Q
- 30S ribosomal protein S12
- Chain T
- 30S ribosomal protein S15
- Chain V
- 30S ribosomal protein S17
Coloring options: