3D structure

PDB id
6WNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GGGCUGCUC*GUAAAAC*GGAAGAUGUAACGGGGC
Length
33 nucleotides
Bulged bases
6WNW|1|4|A|1255, 6WNW|1|4|U|1258
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WNW|1|4|G|1024
6WNW|1|4|G|1025
6WNW|1|4|G|1026
6WNW|1|4|C|1027
6WNW|1|4|U|1028
6WNW|1|4|G|1029
6WNW|1|4|C|1030
6WNW|1|4|U|1031
6WNW|1|4|C|1032
*
6WNW|1|4|G|1152
6WNW|1|4|U|1153
6WNW|1|4|A|1154
6WNW|1|4|A|1155
6WNW|1|4|A|1156
6WNW|1|4|A|1157
6WNW|1|4|C|1158
*
6WNW|1|4|G|1252
6WNW|1|4|G|1253
6WNW|1|4|A|1254
6WNW|1|4|A|1255
6WNW|1|4|G|1256
6WNW|1|4|A|1257
6WNW|1|4|U|1258
6WNW|1|4|G|1259
6WNW|1|4|U|1260
6WNW|1|4|A|1261
6WNW|1|4|A|1262
6WNW|1|4|C|1263
6WNW|1|4|G|1264
6WNW|1|4|G|1265
6WNW|1|4|G|1266
6WNW|1|4|G|1267
6WNW|1|4|C|1268

Current chains

Chain 4
23s-5s joint ribosomal RNA

Nearby chains

Chain F
50S ribosomal protein L36
Chain c
50S ribosomal protein L3
Chain j
50S ribosomal protein L13
Chain m
50S ribosomal protein L16

Coloring options:

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