J3_6WQN_011
3D structure
- PDB id
- 6WQN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GUUAAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 6WQN|1|1|U|2853, 6WQN|1|1|A|2855
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6WQN_011 not in the Motif Atlas
- Homologous match to J3_7RQB_014
- Geometric discrepancy: 0.1693
- The information below is about J3_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_95952.1
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6WQN|1|1|C|2834
6WQN|1|1|C|2835
*
6WQN|1|1|G|2851
6WQN|1|1|U|2852
6WQN|1|1|U|2853
6WQN|1|1|A|2854
6WQN|1|1|A|2855
6WQN|1|1|U|2856
*
6WQN|1|1|A|2902
6WQN|1|1|A|2903
6WQN|1|1|U|2904
6WQN|1|1|C|2905
6WQN|1|1|G|2906
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L32
- Chain Z
- 50S ribosomal protein L17
Coloring options: