J3_6WRS_003

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAAAC*GGGUUGUA*UG

Length

15 nucleotides

Bulged bases

6WRS|1|1|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6WRS_003 not in the Motif Atlas

Homologous match to J3_7RQB_003

Geometric discrepancy: 0.1911

The information below is about J3_7RQB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_97921.1

Basepair signature

cWW-F-F-tSH-tWH-F-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

6WRS|1|1|C|272
6WRS|1|1|A|273
6WRS|1|1|A|274
6WRS|1|1|A|275
6WRS|1|1|C|276
*
6WRS|1|1|G|295
6WRS|1|1|G|296
6WRS|1|1|G|297
6WRS|1|1|U|298
6WRS|1|1|U|299
6WRS|1|1|G|300
6WRS|1|1|U|301
6WRS|1|1|A|302
*
6WRS|1|1|U|415
6WRS|1|1|G|416

Current chains

Chain 1

23S rRNA

Nearby chains