J3_6WYV_004

3D structure

PDB id

6WYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 47 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GAUGUUGG*CCAUCAUUUAAAGAAAG*CUCAC

Length

30 nucleotides

Bulged bases

6WYV|1|I|U|1061, 6WYV|1|I|U|1078, 6WYV|1|I|A|1084

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WYV|1|I|G|1056
6WYV|1|I|A|1057
6WYV|1|I|U|1058
6WYV|1|I|G|1059
6WYV|1|I|U|1060
6WYV|1|I|U|1061
6WYV|1|I|G|1062
6WYV|1|I|G|1063
*
6WYV|1|I|C|1075
6WYV|1|I|C|1076
6WYV|1|I|A|1077
6WYV|1|I|U|1078
6WYV|1|I|C|1079
6WYV|1|I|A|1080
6WYV|1|I|U|1081
6WYV|1|I|U|1082
6WYV|1|I|U|1083
6WYV|1|I|A|1084
6WYV|1|I|A|1085
6WYV|1|I|A|1086
6WYV|1|I|G|1087
6WYV|1|I|A|1088
6WYV|1|I|A|1089
6WYV|1|I|A|1090
6WYV|1|I|G|1091
*
6WYV|1|I|C|1100
6WYV|1|I|U|1101
6WYV|1|I|C|1102
6WYV|1|I|A|1103
6WYV|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains