J3_6WYV_007

3D structure

PDB id

6WYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 47 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CUGAAC*GUUCUAAC*GGACAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WYV|1|I|C|2091
6WYV|1|I|U|2092
6WYV|1|I|G|2093
6WYV|1|I|A|2094
6WYV|1|I|A|2095
6WYV|1|I|C|2096
*
6WYV|1|I|G|2193
6WYV|1|I|U|2194
6WYV|1|I|U|2195
6WYV|1|I|C|2196
6WYV|1|I|U|2197
6WYV|1|I|A|2198
6WYV|1|I|A|2199
6WYV|1|I|C|2200
*
6WYV|1|I|G|2223
6WYV|1|I|G|2224
6WYV|1|I|A|2225
6WYV|1|I|C|2226
6WYV|1|I|A|2227
6WYV|1|I|G|2228

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L2