J3_6X7F_006
3D structure
- PDB id
- 6X7F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGGA*UAC*GGAAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6X7F|1|D|G|942
6X7F|1|D|U|943
6X7F|1|D|G|944
6X7F|1|D|G|945
6X7F|1|D|A|946
*
6X7F|1|D|U|1235
6X7F|1|D|A|1236
6X7F|1|D|C|1237
*
6X7F|1|D|G|1337
6X7F|1|D|G|1338
6X7F|1|D|A|1339
6X7F|1|D|A|1340
6X7F|1|D|U|1341
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain A
- Transfer RNA; tRNA
- Chain B
- Transfer RNA; tRNA
- Chain M
- 30S ribosomal protein S7
- Chain O
- 30S ribosomal protein S9
- Chain X
- 30S ribosomal protein S13
Coloring options: