J3_6XHX_050

3D structure

PDB id

6XHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GGAAC*GGUGCCC*GGGAGCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHX|1|2a|G|1002
6XHX|1|2a|G|1003
6XHX|1|2a|A|1004
6XHX|1|2a|A|1005
6XHX|1|2a|C|1006
*
6XHX|1|2a|G|1023
6XHX|1|2a|G|1024
6XHX|1|2a|U|1025
6XHX|1|2a|G|1026
6XHX|1|2a|C|1027
6XHX|1|2a|C|1028
6XHX|1|2a|C|1029
*
6XHX|1|2a|G|1032
6XHX|1|2a|G|1033
6XHX|1|2a|G|1034
6XHX|1|2a|A|1035
6XHX|1|2a|G|1036
6XHX|1|2a|C|1037
6XHX|1|2a|C|1038

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains