J3_6XQE_042
3D structure
- PDB id
- 6XQE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCAUAGC*GCG*UCG
- Length
- 13 nucleotides
- Bulged bases
- 6XQE|1|2B|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XQE|1|2B|C|11
6XQE|1|2B|C|12
6XQE|1|2B|A|13
6XQE|1|2B|U|14
6XQE|1|2B|A|15
6XQE|1|2B|G|16
6XQE|1|2B|C|17
*
6XQE|1|2B|G|67
6XQE|1|2B|C|68
6XQE|1|2B|G|69
*
6XQE|1|2B|U|108
6XQE|1|2B|C|109
6XQE|1|2B|G|110
Current chains
- Chain 2B
- 5S Ribosomal RNA
Nearby chains
- Chain 20
- 50S ribosomal protein L27
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2S
- 50S ribosomal protein L18
- Chain 2Z
- 50S ribosomal protein L25
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