J3_6XQE_074

3D structure

PDB id

6XQE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCUUGACAUG*CACAG*CUUACGG

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XQE|1|2a|C|989
6XQE|1|2a|C|990
6XQE|1|2a|U|991
6XQE|1|2a|U|992
6XQE|1|2a|G|993
6XQE|1|2a|A|994
6XQE|1|2a|C|995
6XQE|1|2a|A|996
6XQE|1|2a|U|997
6XQE|1|2a|G|998
*
6XQE|1|2a|C|1043
6XQE|1|2a|A|1044
6XQE|1|2a|C|1045
6XQE|1|2a|A|1046
6XQE|1|2a|G|1047
*
6XQE|1|2a|C|1210
6XQE|1|2a|U|1211
6XQE|1|2a|U|1212
6XQE|1|2a|A|1213
6XQE|1|2a|C|1214
6XQE|1|2a|G|1215
6XQE|1|2a|G|1216

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2n

30S ribosomal protein S14 type Z