J3_6XYW_007

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

UGGAAG*CCCAAAC*GUGAA

Length

18 nucleotides

Bulged bases

6XYW|1|1|A|1944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|U|1461
6XYW|1|1|G|1462
6XYW|1|1|G|1463
6XYW|1|1|A|1464
6XYW|1|1|A|1465
6XYW|1|1|G|1466
*
6XYW|1|1|C|1940
6XYW|1|1|C|1941
6XYW|1|1|C|1942
6XYW|1|1|A|1943
6XYW|1|1|A|1944
6XYW|1|1|A|1945
6XYW|1|1|C|1946
*
6XYW|1|1|G|1955
6XYW|1|1|U|1956
6XYW|1|1|G|1957
6XYW|1|1|A|1958
6XYW|1|1|A|1959

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain AG

At5g40080

Chain AN

At3g51010