J3_6XYW_014

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

UU*AAGAAAG*CG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|U|207
6XYW|1|2|U|208
*
6XYW|1|2|A|223
6XYW|1|2|A|224
6XYW|1|2|G|225
6XYW|1|2|A|226
6XYW|1|2|A|227
6XYW|1|2|A|228
6XYW|1|2|G|229
*
6XYW|1|2|C|238
6XYW|1|2|G|239

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain Bv

AT5g49210/K21P3_8

Chain By

28S ribosomal S34 protein