J3_6XYW_017

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

UUCG*CUCAG*CGUGAA

Length

15 nucleotides

Bulged bases

6XYW|1|2|U|864

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|U|823
6XYW|1|2|U|824
6XYW|1|2|C|825
6XYW|1|2|G|826
*
6XYW|1|2|C|851
6XYW|1|2|U|852
6XYW|1|2|C|853
6XYW|1|2|A|854
6XYW|1|2|G|855
*
6XYW|1|2|C|862
6XYW|1|2|G|863
6XYW|1|2|U|864
6XYW|1|2|G|865
6XYW|1|2|A|866
6XYW|1|2|A|867

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain Ba

Ribosomal protein S2, mitochondrial

Chain Bd

At1g64880

Chain Bg

40S ribosomal protein S15a-5

Chain Bs

Ribosomal protein S21 family protein

Chain Bu

Uncharacterized protein