J3_6XYW_026
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CACUACGGUGA*UGCGC*GUCCAAG
- Length
- 23 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XYW|1|3|C|9
6XYW|1|3|A|10
6XYW|1|3|C|11
6XYW|1|3|U|12
6XYW|1|3|A|13
6XYW|1|3|C|14
6XYW|1|3|G|15
6XYW|1|3|G|16
6XYW|1|3|U|17
6XYW|1|3|G|18
6XYW|1|3|A|19
*
6XYW|1|3|U|69
6XYW|1|3|G|70
6XYW|1|3|C|71
6XYW|1|3|G|72
6XYW|1|3|C|73
*
6XYW|1|3|G|104
6XYW|1|3|U|105
6XYW|1|3|C|106
6XYW|1|3|C|107
6XYW|1|3|A|108
6XYW|1|3|A|109
6XYW|1|3|G|110
Current chains
- Chain 3
- RNA (118-MER)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ao
- At5g27820
- Chain Av
- Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein
- Chain Aw
- 50S ribosomal protein L27
Coloring options: