J3_6XYW_029

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

CAGGA*UUUGAAG*CACUG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|C|1202
6XYW|1|1|A|1203
6XYW|1|1|G|1204
6XYW|1|1|G|1205
6XYW|1|1|A|1206
*
6XYW|1|1|U|1230
6XYW|1|1|U|1231
6XYW|1|1|U|1232
6XYW|1|1|G|1233
6XYW|1|1|A|1234
6XYW|1|1|A|1235
6XYW|1|1|G|1236
*
6XYW|1|1|C|1251
6XYW|1|1|A|1252
6XYW|1|1|C|1253
6XYW|1|1|U|1254
6XYW|1|1|G|1255

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain AE

Ribosomal protein

Chain AJ

39S ribosomal protein

Chain Ah

50S ribosomal protein L10

Chain Ai

At4g35490