J3_6XYW_030

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GCUUU*AGUGAAUC*GUAC

Length

17 nucleotides

Bulged bases

6XYW|1|1|G|1498

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|G|1467
6XYW|1|1|C|1468
6XYW|1|1|U|1469
6XYW|1|1|U|1470
6XYW|1|1|U|1471
*
6XYW|1|1|A|1495
6XYW|1|1|G|1496
6XYW|1|1|U|1497
6XYW|1|1|G|1498
6XYW|1|1|A|1499
6XYW|1|1|A|1500
6XYW|1|1|U|1501
6XYW|1|1|C|1502
*
6XYW|1|1|G|1936
6XYW|1|1|U|1937
6XYW|1|1|A|1938
6XYW|1|1|C|1939

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain AG

At5g40080

Chain AN

At3g51010

Chain At

At4g39880

Chain Ay

At1g07830/F24B9_7