J3_6XYW_036

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

CGGA*UCC*GUUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|C|84
6XYW|1|2|G|85
6XYW|1|2|G|88
6XYW|1|2|A|89
*
6XYW|1|2|U|119
6XYW|1|2|C|120
6XYW|1|2|C|128
*
6XYW|1|2|G|154
6XYW|1|2|U|155
6XYW|1|2|U|156
6XYW|1|2|G|157

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain BC

At5g26800

Chain BI

rPPR*

Chain BJ

rPPR*

Chain By

28S ribosomal S34 protein