J3_6XYW_039

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GCACAAG*CUAGUAA*UGAAUAUGUACCC

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|G|926
6XYW|1|2|C|927
6XYW|1|2|A|928
6XYW|1|2|C|929
6XYW|1|2|A|930
6XYW|1|2|A|931
6XYW|1|2|G|932
*
6XYW|1|2|C|1693
6XYW|1|2|U|1694
6XYW|1|2|A|1695
6XYW|1|2|G|1696
6XYW|1|2|U|1697
6XYW|1|2|A|1698
6XYW|1|2|A|1699
*
6XYW|1|2|U|1721
6XYW|1|2|G|1722
6XYW|1|2|A|1723
6XYW|1|2|A|1724
6XYW|1|2|U|1725
6XYW|1|2|A|1726
6XYW|1|2|U|1727
6XYW|1|2|G|1728
6XYW|1|2|U|1729
6XYW|1|2|A|1730
6XYW|1|2|C|1731
6XYW|1|2|C|1732
6XYW|1|2|C|1733

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain Bf

Ribosomal protein S7, mitochondrial

Chain Bh

30S ribosomal protein S9, mitochondrial