J3_6XYW_043

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

CCAGACCUA*UAGGCCA*UGGCGGCGG

Length

25 nucleotides

Bulged bases

6XYW|1|2|G|1206, 6XYW|1|2|G|1383

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|C|1184
6XYW|1|2|C|1185
6XYW|1|2|A|1186
6XYW|1|2|G|1187
6XYW|1|2|A|1188
6XYW|1|2|C|1189
6XYW|1|2|C|1190
6XYW|1|2|U|1191
6XYW|1|2|A|1192
*
6XYW|1|2|U|1203
6XYW|1|2|A|1204
6XYW|1|2|G|1205
6XYW|1|2|G|1206
6XYW|1|2|C|1207
6XYW|1|2|C|1208
6XYW|1|2|A|1209
*
6XYW|1|2|U|1379
6XYW|1|2|G|1380
6XYW|1|2|G|1381
6XYW|1|2|C|1382
6XYW|1|2|G|1383
6XYW|1|2|G|1384
6XYW|1|2|C|1385
6XYW|1|2|G|1386
6XYW|1|2|G|1387

Current chains

Chain 2

RNA (1743-MER)

Nearby chains