J3_6Y2L_003

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CC*GAGGGAGCGAGACCCGUCGCCG*CACGGGG

Length

31 nucleotides

Bulged bases

6Y2L|1|L5|G|965, 6Y2L|1|L5|C|967, 6Y2L|1|L5|C|968, 6Y2L|1|L5|C|969, 6Y2L|1|L5|U|971, 6Y2L|1|L5|C|1280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y2L|1|L5|C|712
6Y2L|1|L5|C|713
*
6Y2L|1|L5|G|955
6Y2L|1|L5|A|956
6Y2L|1|L5|G|957
6Y2L|1|L5|G|958
6Y2L|1|L5|G|959
6Y2L|1|L5|A|960
6Y2L|1|L5|G|961
6Y2L|1|L5|C|962
6Y2L|1|L5|G|963
6Y2L|1|L5|A|964
6Y2L|1|L5|G|965
6Y2L|1|L5|A|966
6Y2L|1|L5|C|967
6Y2L|1|L5|C|968
6Y2L|1|L5|C|969
6Y2L|1|L5|G|970
6Y2L|1|L5|U|971
6Y2L|1|L5|C|972
6Y2L|1|L5|G|973
6Y2L|1|L5|C|974
6Y2L|1|L5|C|975
6Y2L|1|L5|G|976
*
6Y2L|1|L5|C|1278
6Y2L|1|L5|A|1279
6Y2L|1|L5|C|1280
6Y2L|1|L5|G|1281
6Y2L|1|L5|G|1282
6Y2L|1|L5|G|1283
6Y2L|1|L5|G|1284

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein L7

Chain Le

60S ribosomal protein L32