J3_6Y2L_034

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

6Y2L|1|L5|C|704, 6Y2L|1|L5|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y2L|1|L5|C|451
6Y2L|1|L5|A|452
6Y2L|1|L5|G|453
6Y2L|1|L5|U|454
6Y2L|1|L5|C|455
*
6Y2L|1|L5|G|701
6Y2L|1|L5|U|702
6Y2L|1|L5|G|703
6Y2L|1|L5|C|704
6Y2L|1|L5|G|705
*
6Y2L|1|L5|C|1292
6Y2L|1|L5|G|1293
6Y2L|1|L5|A|1294
6Y2L|1|L5|C|1295
6Y2L|1|L5|G|1296

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a

Chain Lr

60S ribosomal protein L28