J3_6Y57_040

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAUUCG*CCUGCUUCU*AAGG

Length

19 nucleotides

Bulged bases

6Y57|1|L5|A|5061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|C|4970
6Y57|1|L5|A|4971
6Y57|1|L5|U|4972
6Y57|1|L5|U|4973
6Y57|1|L5|C|4974
6Y57|1|L5|G|4975
*
6Y57|1|L5|C|4983
6Y57|1|L5|C|4984
6Y57|1|L5|U|4985
6Y57|1|L5|G|4986
6Y57|1|L5|C|4987
6Y57|1|L5|U|4988
6Y57|1|L5|U|4989
6Y57|1|L5|C|4990
6Y57|1|L5|U|4991
*
6Y57|1|L5|A|5060
6Y57|1|L5|A|5061
6Y57|1|L5|G|5062
6Y57|1|L5|G|5063

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LP

60S ribosomal protein L17

Chain Ld

60S ribosomal protein L31