J3_6YAL_002
3D structure
- PDB id
- 6YAL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 48S late-stage initiation complex with beta-globin mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGGA*UUAAGA*UA
- Length
- 12 nucleotides
- Bulged bases
- 6YAL|1|2|G|917
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YAL|1|2|U|672
6YAL|1|2|G|673
6YAL|1|2|G|674
6YAL|1|2|A|675
*
6YAL|1|2|U|913
6YAL|1|2|U|914
6YAL|1|2|A|915
6YAL|1|2|A|916
6YAL|1|2|G|917
6YAL|1|2|A|918
*
6YAL|1|2|U|1018
6YAL|1|2|A|1019
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain J
- 40S ribosomal protein eS7
- Chain N
- 40S ribosomal protein uS17
- Chain P
- 40S ribosomal protein uS15
- Chain Y
- 40S ribosomal protein uS8
- Chain Z
- 40S ribosomal protein uS12
- Chain c
- 40S ribosomal protein eS27
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