J3_6YAL_012
3D structure
- PDB id
- 6YAL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 48S late-stage initiation complex with beta-globin mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUGGC*GGAC*GAUUG
- Length
- 14 nucleotides
- Bulged bases
- 6YAL|1|2|A|1472, 6YAL|1|2|U|1473
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YAL|1|2|C|1387
6YAL|1|2|U|1388
6YAL|1|2|G|1389
6YAL|1|2|G|1390
6YAL|1|2|C|1391
*
6YAL|1|2|G|1446
6YAL|1|2|G|1447
6YAL|1|2|A|1448
6YAL|1|2|C|1449
*
6YAL|1|2|G|1471
6YAL|1|2|A|1472
6YAL|1|2|U|1473
6YAL|1|2|U|1474
6YAL|1|2|G|1475
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S Ribosomal protein uS3
- Chain H
- 40S Ribosomal protein uS7
- Chain S
- 40S ribosomal protein uS9
- Chain T
- 40S ribosomal protein eS17
- Chain W
- 40S ribosomal protein uS10
- Chain e
- 40S ribosomal protein uS14
- Chain g
- ribosomal protein RACK1
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