J3_6YAN_015
3D structure
- PDB id
- 6YAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 48S late-stage translation initiation complex with histone 4 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.48 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 6YAN|1|2|U|1473
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YAN|1|2|C|1387
6YAN|1|2|U|1388
6YAN|1|2|G|1389
6YAN|1|2|G|1390
6YAN|1|2|C|1391
*
6YAN|1|2|G|1446
6YAN|1|2|G|1447
6YAN|1|2|A|1448
6YAN|1|2|C|1449
6YAN|1|2|A|1450
6YAN|1|2|A|1451
6YAN|1|2|G|1452
*
6YAN|1|2|C|1466
6YAN|1|2|C|1467
6YAN|1|2|C|1468
6YAN|1|2|G|1469
6YAN|1|2|A|1470
6YAN|1|2|G|1471
6YAN|1|2|A|1472
6YAN|1|2|U|1473
6YAN|1|2|U|1474
6YAN|1|2|G|1475
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain F
- Ribosomal protein S3
- Chain H
- Ribosomal protein S5
- Chain S
- ribosomal protein uS9
- Chain T
- ribosomal protein eS17
- Chain W
- Ribosomal_S10 domain-containing protein
- Chain e
- ribosomal protein uS14
- Chain g
- ribosomal protein RACK1
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