J3_6YDW_003

3D structure

PDB id

6YDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UU*AAUAACC*GA

Length

11 nucleotides

Bulged bases

6YDW|1|AA|C|372

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDW|1|AA|U|326
6YDW|1|AA|U|327
*
6YDW|1|AA|A|367
6YDW|1|AA|A|368
6YDW|1|AA|U|369
6YDW|1|AA|A|370
6YDW|1|AA|A|371
6YDW|1|AA|C|372
6YDW|1|AA|C|373
*
6YDW|1|AA|G|383
6YDW|1|AA|A|384

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

Uncharacterized protein

Chain AK

uS11m

Chain AR

Mitochondrial ribosomal protein S18C

Chain AU

bS21m

Chain Am

mS37