J3_6YDW_011

3D structure

PDB id

6YDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CACGCUUA*UAACC*GAG

Length

16 nucleotides

Bulged bases

6YDW|1|BA|A|757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDW|1|BA|C|669
6YDW|1|BA|A|670
6YDW|1|BA|C|671
6YDW|1|BA|G|672
6YDW|1|BA|C|673
6YDW|1|BA|U|674
6YDW|1|BA|U|675
6YDW|1|BA|A|676
*
6YDW|1|BA|U|755
6YDW|1|BA|A|756
6YDW|1|BA|A|757
6YDW|1|BA|C|758
6YDW|1|BA|C|759
*
6YDW|1|BA|G|768
6YDW|1|BA|A|769
6YDW|1|BA|G|770

Current chains

Chain BA

12S rRNA

Nearby chains

Chain B7

Mitochondrial ribosomal protein L34

Chain BX

Uncharacterized protein

Chain Be

Mitochondrial ribosomal protein L41

Chain Bw

39S ribosomal protein S30, mitochondrial