J3_6YDW_017
3D structure
- PDB id
- 6YDW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CUAG*CUAUAGAGAUAGUAC*GGAAAG
- Length
- 25 nucleotides
- Bulged bases
- 6YDW|1|BA|U|109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YDW|1|BA|C|8
6YDW|1|BA|U|9
6YDW|1|BA|A|10
6YDW|1|BA|G|11
*
6YDW|1|BA|C|106
6YDW|1|BA|U|107
6YDW|1|BA|A|108
6YDW|1|BA|U|109
6YDW|1|BA|A|110
6YDW|1|BA|G|111
6YDW|1|BA|A|112
6YDW|1|BA|G|113
6YDW|1|BA|A|114
6YDW|1|BA|U|115
6YDW|1|BA|A|116
6YDW|1|BA|G|117
6YDW|1|BA|U|118
6YDW|1|BA|A|119
6YDW|1|BA|C|120
*
6YDW|1|BA|G|127
6YDW|1|BA|G|128
6YDW|1|BA|A|129
6YDW|1|BA|A|130
6YDW|1|BA|A|131
6YDW|1|BA|G|132
Current chains
- Chain BA
- 12S rRNA
Nearby chains
- Chain B2
- Mitochondrial ribosomal protein L47
- Chain B7
- Mitochondrial ribosomal protein L34
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BU
- Mitochondrial ribosomal protein L20
- Chain BX
- Uncharacterized protein
- Chain BY
- Uncharacterized protein
- Chain Be
- Mitochondrial ribosomal protein L41
- Chain Bh
- Uncharacterized protein
- Chain Bi
- Mitochondrial ribosomal protein L45
- Chain Bn
- Mitochondrial ribosomal protein L51
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