J3_6YEF_021
3D structure
- PDB id
- 6YEF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex with assigned rRNA modifications from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUGACAAC*GCCUUCCC*GGGACAA
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YEF|1|a|U|1009
6YEF|1|a|U|1010
6YEF|1|a|U|1011
6YEF|1|a|G|1012
6YEF|1|a|A|1013
6YEF|1|a|C|1014
6YEF|1|a|A|1015
6YEF|1|a|A|1016
6YEF|1|a|C|1017
*
6YEF|1|a|G|1030
6YEF|1|a|C|1031
6YEF|1|a|C|1032
6YEF|1|a|U|1033
6YEF|1|a|U|1034
6YEF|1|a|C|1035
6YEF|1|a|C|1036
6YEF|1|a|C|1037
*
6YEF|1|a|G|1044
6YEF|1|a|G|1045
6YEF|1|a|G|1046
6YEF|1|a|A|1047
6YEF|1|a|C|1048
6YEF|1|a|A|1049
6YEF|1|a|A|1050
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain n
- 30S ribosomal protein S14
Coloring options: