3D structure

PDB id
6YLX (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-60S State NE1 (TAP-Flag-Nop53)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GAC*GCUAAGGAGUG*CUCAC
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6YLX|1|1|G|1230
6YLX|1|1|A|1231
6YLX|1|1|C|1232
*
6YLX|1|1|G|1256
6YLX|1|1|C|1257
6YLX|1|1|U|1258
6YLX|1|1|A|1259
6YLX|1|1|A|1260
6YLX|1|1|G|1261
6YLX|1|1|G|1262
6YLX|1|1|A|1263
6YLX|1|1|G|1264
6YLX|1|1|U|1265
6YLX|1|1|G|1266
*
6YLX|1|1|C|1275
6YLX|1|1|U|1276
6YLX|1|1|C|1277
6YLX|1|1|A|1278
6YLX|1|1|C|1279

Current chains

Chain 1
25S rRNA

Nearby chains

Chain W
Ribosome assembly factor MRT4
Chain r
Ribosome biogenesis protein NSA2

Coloring options:

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