J3_6YLX_018
3D structure
- PDB id
- 6YLX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-60S State NE1 (TAP-Flag-Nop53)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UCGAUC*GGAAUC*GAA
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YLX|1|1|U|1526
6YLX|1|1|C|1527
6YLX|1|1|G|1528
6YLX|1|1|A|1529
6YLX|1|1|U|1530
6YLX|1|1|C|1531
*
6YLX|1|1|G|1591
6YLX|1|1|G|1592
6YLX|1|1|A|1593
6YLX|1|1|A|1594
6YLX|1|1|U|1595
6YLX|1|1|C|1596
*
6YLX|1|1|G|1611
6YLX|1|1|A|1612
6YLX|1|1|A|1613
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain X
- 60S ribosomal protein L25
- Chain g
- 60S ribosomal protein L34-A
- Chain k
- 60S ribosomal protein L38
- Chain l
- 60S ribosomal protein L39
- Chain n
- Pescadillo homolog
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