J3_6YSI_008

3D structure

PDB id

6YSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AG*UGAAAG*UGAAAGU

Length

15 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSI|1|1|A|1432
6YSI|1|1|G|1433
*
6YSI|1|1|U|1454
6YSI|1|1|G|1455
6YSI|1|1|A|1456
6YSI|1|1|A|1457
6YSI|1|1|A|1458
6YSI|1|1|G|1459
*
6YSI|1|1|U|1509
6YSI|1|1|G|1510
6YSI|1|1|A|1511
6YSI|1|1|A|1535
6YSI|1|1|A|1536
6YSI|1|1|G|1537
6YSI|1|1|U|1538

Current chains

Chain 1

23S ribosomal RNA

Nearby chains