J3_6YSI_020
3D structure
- PDB id
- 6YSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CUCAGC*GCGUAGAG*CAAAAG
- Length
- 20 nucleotides
- Bulged bases
- 6YSI|1|1|U|2308, 6YSI|1|1|A|2323, 6YSI|1|1|A|2325
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YSI|1|1|C|2284
6YSI|1|1|U|2285
6YSI|1|1|C|2286
6YSI|1|1|A|2287
6YSI|1|1|G|2288
6YSI|1|1|C|2289
*
6YSI|1|1|G|2305
6YSI|1|1|C|2306
6YSI|1|1|G|2307
6YSI|1|1|U|2308
6YSI|1|1|A|2309
6YSI|1|1|G|2310
6YSI|1|1|A|2311
6YSI|1|1|G|2312
*
6YSI|1|1|C|2321
6YSI|1|1|A|2322
6YSI|1|1|A|2323
6YSI|1|1|A|2324
6YSI|1|1|A|2325
6YSI|1|1|G|2326
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 50S ribosomal protein L5
- Chain K
- 50S ribosomal protein L18
- Chain S
- 50S ribosomal protein L27
Coloring options: