3D structure

PDB id
6YST (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UCGACC*GAAAC*GUA
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6YST|1|A|U|1344
6YST|1|A|C|1345
6YST|1|A|G|1346
6YST|1|A|A|1347
6YST|1|A|C|1348
6YST|1|A|C|1349
*
6YST|1|A|G|1382
6YST|1|A|A|1383
6YST|1|A|A|1384
6YST|1|A|A|1385
6YST|1|A|C|1386
*
6YST|1|A|G|1401
6YST|1|A|U|1402
6YST|1|A|A|1403

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain T
50S ribosomal protein L23

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2681 s
Application loaded.