J3_6YSU_030

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGA*UUAAAGAAAGC*GCUCAC

Length

20 nucleotides

Bulged bases

6YSU|1|A|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|A|G|1055
6YSU|1|A|G|1056
6YSU|1|A|A|1057
*
6YSU|1|A|U|1082
6YSU|1|A|U|1083
6YSU|1|A|A|1084
6YSU|1|A|A|1085
6YSU|1|A|A|1086
6YSU|1|A|G|1087
6YSU|1|A|A|1088
6YSU|1|A|A|1089
6YSU|1|A|A|1090
6YSU|1|A|G|1091
6YSU|1|A|C|1092
*
6YSU|1|A|G|1099
6YSU|1|A|C|1100
6YSU|1|A|U|1101
6YSU|1|A|C|1102
6YSU|1|A|A|1103
6YSU|1|A|C|1104

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain 5

50S ribosomal protein L10

Chain I

50S ribosomal protein L11