J3_6Z1P_001
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GC*GUGAAAAG*CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6Z1P_001 not in the Motif Atlas
- Geometric match to J3_4WF9_010
- Geometric discrepancy: 0.1221
- The information below is about J3_4WF9_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_68715.1
- Basepair signature
- cWW-tWH-cWW-tSH-F-cWW-F
- Number of instances in this motif group
- 10
Unit IDs
6Z1P|1|Aa|G|31
6Z1P|1|Aa|C|32
*
6Z1P|1|Ab|G|377
6Z1P|1|Ab|U|378
6Z1P|1|Ab|G|379
6Z1P|1|Ab|A|380
6Z1P|1|Ab|A|381
6Z1P|1|Ab|A|382
6Z1P|1|Ab|A|383
6Z1P|1|Ab|G|384
*
6Z1P|1|Ab|C|407
6Z1P|1|Ab|C|408
Current chains
- Chain Aa
- LSU rRNA_1
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AT
- Signal peptide-binding domain protein
- Chain Aw
- Ribosomal protein L22/L17e
- Chain Ay
- 50S ribosomal protein L24
Coloring options: