J3_6Z1P_009

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUUAC*GUGUAAGUCG*CGUAC

Length

21 nucleotides

Bulged bases

6Z1P|1|Ab|A|1215

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ab|G|1184
6Z1P|1|Ab|G|1185
6Z1P|1|Ab|U|1186
6Z1P|1|Ab|U|1187
6Z1P|1|Ab|A|1188
6Z1P|1|Ab|C|1189
*
6Z1P|1|Ab|G|1211
6Z1P|1|Ab|U|1212
6Z1P|1|Ab|G|1213
6Z1P|1|Ab|U|1214
6Z1P|1|Ab|A|1215
6Z1P|1|Ab|A|1216
6Z1P|1|Ab|G|1217
6Z1P|1|Ab|U|1218
6Z1P|1|Ab|C|1219
6Z1P|1|Ab|G|1220
*
6Z1P|1|Ab|C|1363
6Z1P|1|Ab|G|1364
6Z1P|1|Ab|U|1365
6Z1P|1|Ab|A|1366
6Z1P|1|Ab|C|1367

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AC

39-S ribosomal protein L47

Chain AI

Ribosomal protein L27

Chain Aa

LSU rRNA_1

Chain Ax

Ribosomal protein L23, putative