J3_6Z1P_011

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUA*UACAUA*UUUUUG

Length

15 nucleotides

Bulged bases

6Z1P|1|Ab|U|1921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ab|U|1810
6Z1P|1|Ab|U|1811
6Z1P|1|Ab|A|1812
*
6Z1P|1|Ab|U|1889
6Z1P|1|Ab|A|1890
6Z1P|1|Ab|C|1891
6Z1P|1|Ab|A|1892
6Z1P|1|Ab|U|1893
6Z1P|1|Ab|A|1894
*
6Z1P|1|Ab|U|1917
6Z1P|1|Ab|U|1918
6Z1P|1|Ab|U|1919
6Z1P|1|Ab|U|1920
6Z1P|1|Ab|U|1921
6Z1P|1|Ab|G|1922

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AB

Ribosomal protein L28

Chain Ac

Ribosomal protein L2

Chain Al

Ribosomal protein L9, amine-terminal domain protein