J3_6Z1P_012

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUA*UCAUAUUGACCCG*CGAUCAAC

Length

24 nucleotides

Bulged bases

6Z1P|1|Ab|A|2120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ab|G|1976
6Z1P|1|Ab|U|1977
6Z1P|1|Ab|A|1978
*
6Z1P|1|Ab|U|2078
6Z1P|1|Ab|C|2079
6Z1P|1|Ab|A|2080
6Z1P|1|Ab|U|2081
6Z1P|1|Ab|A|2082
6Z1P|1|Ab|U|2083
6Z1P|1|Ab|U|2084
6Z1P|1|Ab|G|2085
6Z1P|1|Ab|A|2086
6Z1P|1|Ab|C|2087
6Z1P|1|Ab|C|2088
6Z1P|1|Ab|C|2089
6Z1P|1|Ab|G|2090
*
6Z1P|1|Ab|C|2114
6Z1P|1|Ab|G|2115
6Z1P|1|Ab|A|2116
6Z1P|1|Ab|U|2117
6Z1P|1|Ab|C|2118
6Z1P|1|Ab|A|2119
6Z1P|1|Ab|A|2120
6Z1P|1|Ab|C|2121

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AA

50S ribosomal protein L27

Chain AE

50S ribosomal protein L33

Chain AF

bL35m

Chain Aa

LSU rRNA_1

Chain Aq

Ribosomal protein L15, putative