J3_6Z1P_013

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGGUA*UCAAUAUU*AAUAUAC

Length

20 nucleotides

Bulged bases

6Z1P|1|Ab|A|2013, 6Z1P|1|Ab|A|2028

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ab|G|1989
6Z1P|1|Ab|G|1990
6Z1P|1|Ab|G|1991
6Z1P|1|Ab|U|1992
6Z1P|1|Ab|A|1993
*
6Z1P|1|Ab|U|2011
6Z1P|1|Ab|C|2012
6Z1P|1|Ab|A|2013
6Z1P|1|Ab|A|2014
6Z1P|1|Ab|U|2015
6Z1P|1|Ab|A|2016
6Z1P|1|Ab|U|2017
6Z1P|1|Ab|U|2018
*
6Z1P|1|Ab|A|2025
6Z1P|1|Ab|A|2026
6Z1P|1|Ab|U|2027
6Z1P|1|Ab|A|2028
6Z1P|1|Ab|U|2029
6Z1P|1|Ab|A|2030
6Z1P|1|Ab|C|2031

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AA

50S ribosomal protein L27

Chain AH

mL40

Chain AR

mL103

Chain Af

Ymf69

Chain Av

50S ribosomal protein L21