J3_6Z1P_021

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUCAGG*UACGG*CUUUAUA

Length

19 nucleotides

Bulged bases

6Z1P|1|Bb|C|971, 6Z1P|1|Bb|A|1018

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Bb|U|968
6Z1P|1|Bb|U|969
6Z1P|1|Bb|U|970
6Z1P|1|Bb|C|971
6Z1P|1|Bb|A|972
6Z1P|1|Bb|G|973
6Z1P|1|Bb|G|974
*
6Z1P|1|Bb|U|1017
6Z1P|1|Bb|A|1018
6Z1P|1|Bb|C|1019
6Z1P|1|Bb|G|1020
6Z1P|1|Bb|G|1021
*
6Z1P|1|Bb|C|1221
6Z1P|1|Bb|U|1222
6Z1P|1|Bb|U|1223
6Z1P|1|Bb|U|1224
6Z1P|1|Bb|A|1225
6Z1P|1|Bb|U|1226
6Z1P|1|Bb|A|1227

Current chains

Chain Bb

SSU rRNA_2

Nearby chains

Chain BU

mS89

Chain BX

Ribosomal protein S3

Chain Bn

Ribosomal protein S14

Chain By

mS33