J3_6Z1P_035

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUUCGAA*UUAGUAA*UGAAACAAUAGUC

Length

27 nucleotides

Bulged bases

6Z1P|1|Bb|U|1356

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Bb|G|911
6Z1P|1|Bb|U|912
6Z1P|1|Bb|U|913
6Z1P|1|Bb|C|914
6Z1P|1|Bb|G|915
6Z1P|1|Bb|A|916
6Z1P|1|Bb|A|917
*
6Z1P|1|Bb|U|1355
6Z1P|1|Bb|U|1356
6Z1P|1|Bb|A|1357
6Z1P|1|Bb|G|1358
6Z1P|1|Bb|U|1359
6Z1P|1|Bb|A|1360
6Z1P|1|Bb|A|1361
*
6Z1P|1|Bb|U|1383
6Z1P|1|Bb|G|1384
6Z1P|1|Bb|A|1385
6Z1P|1|Bb|A|1386
6Z1P|1|Bb|A|1387
6Z1P|1|Bb|C|1388
6Z1P|1|Bb|A|1389
6Z1P|1|Bb|A|1390
6Z1P|1|Bb|U|1391
6Z1P|1|Bb|A|1392
6Z1P|1|Bb|G|1393
6Z1P|1|Bb|U|1394
6Z1P|1|Bb|C|1395

Current chains

Chain Bb

SSU rRNA_2

Nearby chains

Chain BB

mS37

Chain Bh

Ymf63

Chain Bi

Ribosomal protein S9

Chain Bk

Ymf61