J3_6Z1P_044

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AU*AAUCU*AGGGGUUAU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Bb|A|1091
6Z1P|1|Bb|U|1092
*
6Z1P|1|Bb|A|1142
6Z1P|1|Bb|A|1143
6Z1P|1|Bb|U|1144
6Z1P|1|Bb|C|1145
6Z1P|1|Bb|U|1146
*
6Z1P|1|Bb|A|1188
6Z1P|1|Bb|G|1189
6Z1P|1|Bb|G|1190
6Z1P|1|Bb|G|1191
6Z1P|1|Bb|G|1192
6Z1P|1|Bb|U|1193
6Z1P|1|Bb|U|1194
6Z1P|1|Bb|A|1195
6Z1P|1|Bb|U|1196

Current chains

Chain Bb

SSU rRNA_2

Nearby chains

Chain Bh

Ymf63

Chain Bi

Ribosomal protein S9

Chain Bj

Ymf59

Chain Bn

Ribosomal protein S14

Chain Bw

Ribosomal death-associated protein