J3_6Z6L_033

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAGUCC*GGUGCG*CGACG

Length

17 nucleotides

Bulged bases

6Z6L|1|L5|C|704, 6Z6L|1|L5|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6L|1|L5|C|451
6Z6L|1|L5|A|452
6Z6L|1|L5|G|453
6Z6L|1|L5|U|454
6Z6L|1|L5|C|455
6Z6L|1|L5|C|456
*
6Z6L|1|L5|G|700
6Z6L|1|L5|G|701
6Z6L|1|L5|U|702
6Z6L|1|L5|G|703
6Z6L|1|L5|C|704
6Z6L|1|L5|G|705
*
6Z6L|1|L5|C|1292
6Z6L|1|L5|G|1293
6Z6L|1|L5|A|1294
6Z6L|1|L5|C|1295
6Z6L|1|L5|G|1296

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a

Chain Lr

60S ribosomal protein L28