J3_6ZJ3_014
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- CC*GGAU*AGUG
- Length
- 10 nucleotides
- Bulged bases
- 6ZJ3|1|LM|G|3934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LM|C|3917
6ZJ3|1|LM|C|3918
*
6ZJ3|1|LM|G|3933
6ZJ3|1|LM|G|3934
6ZJ3|1|LM|A|3935
6ZJ3|1|LM|U|3936
*
6ZJ3|1|LN|A|4045
6ZJ3|1|LN|G|4046
6ZJ3|1|LN|U|4047
6ZJ3|1|LN|G|4048
Current chains
- Chain LM
- LSU rRNA chain 12
- Chain LN
- LSU rRNA chain 13
Nearby chains
- Chain LF
- Large subunit ribosomal RNA; LSU rRNA
- Chain LH
- Large subunit ribosomal RNA; LSU rRNA
- Chain LQ
- Ribosomal protein uL3
- Chain Li
- Ribosomal protein uL22
- Chain Lt
- Ribosomal protein eL31
Coloring options: