J3_6ZJ3_015

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GC*GG*CGACGAC

Length

11 nucleotides

Bulged bases

6ZJ3|1|LN|C|4037

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|LM|G|3939
6ZJ3|1|LM|C|3940
*
6ZJ3|1|LN|G|3993
6ZJ3|1|LN|G|3994
*
6ZJ3|1|LN|C|4034
6ZJ3|1|LN|G|4035
6ZJ3|1|LN|A|4036
6ZJ3|1|LN|C|4037
6ZJ3|1|LN|G|4040
6ZJ3|1|LN|A|4041
6ZJ3|1|LN|C|4042

Current chains

Chain LM

LSU rRNA chain 12

Chain LN

LSU rRNA chain 13

Nearby chains

Chain LQ

Ribosomal protein uL3

Chain Lt

Ribosomal protein eL31