J3_6ZS9_002
3D structure
- PDB id
- 6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with ribosome recycling factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAUUAC*GAUUAACCU*AGC
- Length
- 18 nucleotides
- Bulged bases
- 6ZS9|1|AA|A|691, 6ZS9|1|AA|A|826
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZS9_002 not in the Motif Atlas
- Homologous match to J3_6CZR_058
- Geometric discrepancy: 0.5151
- The information below is about J3_6CZR_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46317.3
- Basepair signature
- cWW-cWW-cSW-cWS-tHW-cWW-cWW-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6ZS9|1|AA|G|687
6ZS9|1|AA|A|688
6ZS9|1|AA|U|689
6ZS9|1|AA|U|690
6ZS9|1|AA|A|691
6ZS9|1|AA|C|692
*
6ZS9|1|AA|G|822
6ZS9|1|AA|A|823
6ZS9|1|AA|U|824
6ZS9|1|AA|U|825
6ZS9|1|AA|A|826
6ZS9|1|AA|A|827
6ZS9|1|AA|C|828
6ZS9|1|AA|C|829
6ZS9|1|AA|U|830
*
6ZS9|1|AA|A|856
6ZS9|1|AA|G|857
6ZS9|1|AA|C|858
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AT
- 28S ribosomal protein S25, mitochondrial
Coloring options: